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Programming: Continuous Integration, JavaScript Frameworks, Visualizing Molecules with Python

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Development
  • Librsvg gets Continuous Integration

    One nice thing about gitlab.gnome.org is that we can now have Continuous Integration (CI) enabled for projects there. After every commit, the CI machinery can build the project, run the tests, and tell you if something goes wrong.

    Carlos Soriano posted a "tips of the week" mail to desktop-devel-list, and a link to how Nautilus implements CI in Gitlab. It turns out that it's reasonably easy to set up: you just create a .gitlab-ci.yml file in the toplevel of your project, and that has the configuration for what to run on every commit.

  • The Brutal Lifecycle of JavaScript Frameworks

    Using the Stack Overflow Trends tool and some of our internal traffic data, we decided to take a look at some of the more prominent UI frameworks: Angular, React, Vue.js, Backbone, Knockout, and Ember.
     

  • Visualizing Molecules with Python

    The PyMOL Wiki also hosts a script library, and it's a good place to look before you start down the road of creating your own script, as someone else may have run into the same issue and may have found a solution you can use. If nothing else, you may be able to find a script that could serve as a starting point for your own particular problem.

    When you're are done working with PyMOL, there are many different ways to end the session. If there is work you are likely to pick up again and continue with, click File→Save Session to save all of the work you just did, including all of the transitions applied to the view. If the changes you made were actually structural, rather than just superficial changes to the way the molecule looked, you can save those structural changes by selecting File→Save Molecule. This allows you to write out the new molecule to a chemical file format, such as a PDB file.

    If you need output for publications or presentations, a few different options are available. Clicking File→Save Image As allows you to select from saving a regular image file in PNG format or writing out data in a POVRay or VRML 3D file format. If you are doing a fancier presentation, you even can export a movie of your molecule by clicking File→Save Movie As. This lets you generate an MPEG movie file that can be used either on a web-based journal or within a slide deck for a presentation.

More in Tux Machines

KaOS 2018.01 KDE-focused Linux distro now available with Spectre and Meltdown fixes

It can be difficult to find a quality Linux distribution that meets your needs. This is partly because there are just too many operating systems from which to choose. My suggestion is to first find a desktop environment that you prefer, and then narrow down your distro search to one that focuses on that DE. For instance, if you like KDE, both Kubuntu and Netrunner are solid choices. With all of that said, there is another KDE-focused Linux distro that I highly recommend. Called "KaOS," it is rolling release, meaning you can alway be confident that your computer is running modern packages. Today, KaOS gets its first updated ISO for 2018, and you should definitely use it to upgrade your install media. Why? Because version 2018.01 has fixes for Spectre and Meltdown thanks to Linux kernel 4.14.14 with both AMD and Intel ucode. Read more

Today in Techrights

KDE: Linux and Qt in Automotive, KDE Discover, Plasma5 18.01 in Slackware

  • Linux and Qt in Automotive? Let’s meet up!
    For anyone around the Gothenburg area on Feb 1st, you are most welcome to the Automotive MeetUp held at the Pelagicore and Luxoft offices. There will be talks about Qt/QML, our embedded Linux platform PELUX and some ramblings about open source in automotive by yours truly ;-)
  • What about AppImage?
    I see a lot of people asking about state of AppImage support in Discover. It’s non-existent, because AppImage does not require centralized software management interfaces like Discover and GNOME Software (or a command-line package manager). AppImage bundles are totally self-contained, and come straight from the developer with zero middlemen, and can be managed on the filesystem using your file manager This should sound awfully familiar to former Mac users (like myself), because Mac App bundles are totally self-contained, come straight from the developer with zero middlemen, and are managed using the Finder file manager.
  • What’s new for January? Plasma5 18.01, and more
    When I sat down to write a new post I noticed that I had not written a single post since the previous Plasma 5 announcement. Well, I guess the past month was a busy one. Also I bought a new e-reader (the Kobo Aura H2O 2nd edition) to replace my ageing Sony PRS-T1. That made me spend a lot of time just reading books and enjoying a proper back-lit E-ink screen. What I read? The War of the Flowers by Tad Williams, A Shadow all of Light by Fred Chappell, Persepolis Rising and several of the short stories (Drive, The Butcher of Anderson Station, The Churn and Strange Dogs) by James SA Corey and finally Red Sister by Mark Lawrence. All very much worth your time.

GNU/Linux: Live Patching, Gravity of Kubernetes, Welcome to 2018

  • How Live Patching Has Improved Xen Virtualization
    The open-source Xen virtualization hypervisor is widely deployed by enterprises and cloud providers alike, which benefit from the continuous innovation that the project delivers. In a video interview with ServerWatch, Lars Kurth, Chairman of the Xen Project Advisory Board and Director, Open Source Solutions at Citrix, details some of the recent additions to Xen and how they are helping move the project forward.
  • The Gravity of Kubernetes
    Most new internet businesses started in the foreseeable future will leverage Kubernetes (whether they realize it or not). Many old applications are migrating to Kubernetes too. Before Kubernetes, there was no standardization around a specific distributed systems platform. Just like Linux became the standard server-side operating system for a single node, Kubernetes has become the standard way to orchestrate all of the nodes in your application. With Kubernetes, distributed systems tools can have network effects. Every time someone builds a new tool for Kubernetes, it makes all the other tools better. And it further cements Kubernetes as the standard.
  • Welcome to 2018
    The image of the technology industry as a whole suffered in 2017, and that process is likely to continue this year as well. That should lead to an increased level of introspection that will certainly affect the free-software community. Many of us got into free software to, among other things, make the world a better place. It is not at all clear that all of our activities are doing that, or what we should do to change that situation. Expect a lively conversation on how our projects should be run and what they should be trying to achieve. Some of that introspection will certainly carry into projects related to machine learning and similar topics. There will be more interesting AI-related free software in 2018, but it may not all be beneficial. How well will the world be served, for example, by a highly capable, free facial-recognition system and associated global database? Our community will be no more effective than anybody else at limiting progress of potentially freedom-reducing technologies, but we should try harder to ensure that our technologies promote and support freedom to the greatest extent possible. Our 2017 predictions missed the fact that an increasing number of security problems are being found at the hardware level. We'll not make the same mistake in 2018. Much of what we think of as "hardware" has a great deal of software built into it — highly proprietary software that runs at the highest privilege levels and which is not subject to third-party review. Of course that software has bugs and security issues of its own; it couldn't really be any other way. We will see more of those issues in 2018, and many of them are likely to prove difficult to fix.