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Open-source software may aid brain imaging to find disease treatments

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Researchers say the open-source software, called PySight, acts as a photon counting add-on for laser scanning microscopes. Because it can image deep into tissue, a laser-based technique known as multiphoton microscopy is often used to study the rapid activity of neurons, blood vessels and other cells at high resolution over time. The method uses laser pulses that excite fluorescent probes, eliciting the emission of photons, some of which are detected and used to form 2D and 3D images.

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  • Microscope add-on could be a game-changer for 2D, 3D brain imaging

    Researchers have developed an add-on for laser-scanning microscopes that can improve the quality of 2D and 3D imaging of the brain, according to a new study published in Optica.

    The add-on, called PySight, includes both hardware and open-source software. A laser-based imaging technique called multiphoton microscopy is often used to capture high-quality 2D and 3D images of neurons, blood vessels and other parts of a patient’s brain, the authors observed, but it can be difficult because the images must be taken quickly. This results in fewer photons being visible in the final image.

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